Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.57□□□□□ -1.04
COL15A1P39059 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.57□□□□□ -1.04
COL15A1P39059 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.57□□□□□ -1.04
COL15A1P39059 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
COL15A1P39059 AL023806.3-201ENST00000638502 2704 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.57□□□□□ -1.04
COL15A1P39059 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
COL15A1P39059 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.57□□□□□ -1.04
COL15A1P39059 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.57□□□□□ -1.04
COL15A1P39059 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.57□□□□□ -1.04
COL15A1P39059 AC099782.1-201ENST00000425889 474 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 AC007679.3-201ENST00000434035 414 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 GTF2IP14-201ENST00000441415 586 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.57□□□□□ -1.04
COL15A1P39059 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.57□□□□□ -1.04
COL15A1P39059 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC8.57□□□□□ -1.04
COL15A1P39059 AP004609.2-201ENST00000532177 190 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.57□□□□□ -1.04
COL15A1P39059 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC8.57□□□□□ -1.04
COL15A1P39059 AC015982.1-201ENST00000608113 465 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 AL589743.6-201ENST00000611025 117 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 AC025262.3-201ENST00000623666 360 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 AC114546.4-201ENST00000624413 369 ntBASIC8.57□□□□□ -1.04
COL15A1P39059 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
COL15A1P39059 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
COL15A1P39059 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.56□□□□□ -1.04
COL15A1P39059 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.56□□□□□ -1.04
COL15A1P39059 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.56□□□□□ -1.04
COL15A1P39059 AL359396.1-201ENST00000623151 2376 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 AC096992.2-201ENST00000609553 1684 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.56□□□□□ -1.04
COL15A1P39059 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 AL355974.1-201ENST00000618896 1708 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
COL15A1P39059 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 RNA5SP188-201ENST00000362916 129 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 RN7SKP237-201ENST00000364663 301 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.56□□□□□ -1.04
COL15A1P39059 AL691447.1-201ENST00000419456 387 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 PSMC1P2-201ENST00000423961 1204 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 RN7SL552P-201ENST00000462094 276 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.56□□□□□ -1.04
COL15A1P39059 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
COL15A1P39059 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
COL15A1P39059 Z97989.1-201ENST00000531702 2421 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 AC004014.2-201ENST00000623718 5122 ntBASIC8.56□□□□□ -1.04
COL15A1P39059 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.56□□□□□ -1.04
COL15A1P39059 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
COL15A1P39059 AC006058.1-201ENST00000568686 5067 ntBASIC8.55□□□□□ -1.04
COL15A1P39059 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
COL15A1P39059 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 AC007938.1-201ENST00000562524 2902 ntBASIC8.55□□□□□ -1.04
COL15A1P39059 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.55□□□□□ -1.04
COL15A1P39059 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.55□□□□□ -1.04
COL15A1P39059 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
COL15A1P39059 QRSL1P1-201ENST00000400977 1540 ntBASIC8.55□□□□□ -1.04
COL15A1P39059 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
COL15A1P39059 RNA5SP433-201ENST00000364491 114 ntBASIC8.55□□□□□ -1.04
COL15A1P39059 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
COL15A1P39059 MIR188-201ENST00000385034 86 ntBASIC8.55□□□□□ -1.04
COL15A1P39059 YWHAZP4-201ENST00000392459 708 ntBASIC8.55□□□□□ -1.04
COL15A1P39059 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms