Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HMGA1P17096 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGA1P17096 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGA1P17096 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
HMGA1P17096 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HMGA1P17096 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGA1P17096 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC009237.3-203ENST00000442128 3551 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HMGA1P17096 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 RNA5SP65-201ENST00000363166 119 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 AL929472.1-201ENST00000417484 429 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGA1P17096 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 EEF1B2P3-201ENST00000447718 678 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 OR7E22P-201ENST00000478335 1035 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGA1P17096 SCARNA5-201ENST00000516201 276 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 Vault.2-201ENST00000516519 98 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGA1P17096 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC106785.4-201ENST00000569492 412 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 AC133552.4-201ENST00000576103 676 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 RN7SL199P-201ENST00000578752 281 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 RN7SL656P-201ENST00000579044 281 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 RN7SL404P-201ENST00000582421 281 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 AC011921.2-201ENST00000589465 152 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 AL589743.6-201ENST00000611025 117 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 AC131009.3-201ENST00000621809 287 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 AC120057.5-201ENST00000623840 154 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 CCDC162P-202ENST00000368966 6751 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 OR6M2P-202ENST00000641780 2063 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 AC104581.5-201ENST00000624171 7141 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HMGA1P17096 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 AF131215.2-201ENST00000531549 1710 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 LINC01613-201ENST00000561476 2780 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 HYDIN2-203ENST00000614586 13885 ntBASIC6.95□□□□□ -1.3
HMGA1P17096 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGA1P17096 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGA1P17096 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGA1P17096 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
HMGA1P17096 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 AC138915.4-201ENST00000565549 4147 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
HMGA1P17096 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGA1P17096 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 RNU1-84P-201ENST00000365447 164 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 RN7SKP86-201ENST00000410454 332 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGA1P17096 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGA1P17096 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGA1P17096 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGA1P17096 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGA1P17096 RARRES2P3-201ENST00000457739 473 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 SULT1D1P-201ENST00000458020 882 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 AC021074.2-201ENST00000468434 172 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 AC117500.1-201ENST00000497352 755 ntBASIC6.94□□□□□ -1.3
HMGA1P17096 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms