Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 OR9M1P-202ENST00000641564 3163 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
ALDH1A1P00352 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 HERC2P3-206ENST00000429257 4088 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC090229.1-201ENST00000590983 1609 ntBASIC9.09□□□□□ -0.95
ALDH1A1P00352 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
ALDH1A1P00352 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
ALDH1A1P00352 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 OR7E11P-202ENST00000642027 1491 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 ZNF887P-201ENST00000431363 1407 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 CYP2AC1P-201ENST00000407830 1173 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 MIR548F1-201ENST00000408667 84 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 EIF4A1P13-201ENST00000415667 230 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 ARL2BPP3-201ENST00000421226 480 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 SNX19-202ENST00000426933 888 ntTSL 2 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 USP9YP35-201ENST00000435696 412 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AL604028.2-201ENST00000437848 788 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 LIN28AP2-201ENST00000445283 458 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 ARL2BPP7-201ENST00000446421 490 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 MED28P8-201ENST00000454831 521 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 RN7SL36P-201ENST00000469345 276 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 RN7SL335P-201ENST00000482790 304 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 RPL21P42-201ENST00000488408 464 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 RN7SL635P-201ENST00000492123 296 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC117522.1-201ENST00000509821 380 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 SNX18P25-201ENST00000510539 758 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 GTF2F2P1-201ENST00000511083 675 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 GAPDHP71-201ENST00000511530 1003 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC010285.3-201ENST00000511668 676 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC100823.2-201ENST00000518337 699 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 SUMO2P19-201ENST00000518920 295 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 OR4A9P-201ENST00000526326 944 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC011270.1-201ENST00000558606 583 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 UBE2CP4-201ENST00000561405 535 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC012640.3-201ENST00000607847 430 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 AC009509.4-201ENST00000619202 509 ntBASIC9.08□□□□□ -0.96
ALDH1A1P00352 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.08□□□□□ -0.96
ALDH1A1P00352 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
ALDH1A1P00352 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC9.07□□□□□ -0.96
ALDH1A1P00352 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC9.07□□□□□ -0.96
ALDH1A1P00352 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC9.07□□□□□ -0.96
ALDH1A1P00352 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
ALDH1A1P00352 AC116456.2-201ENST00000623018 2209 ntBASIC9.07□□□□□ -0.96
ALDH1A1P00352 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC9.07□□□□□ -0.96
ALDH1A1P00352 RNA5SP429-201ENST00000363688 109 ntBASIC9.07□□□□□ -0.96
ALDH1A1P00352 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
ALDH1A1P00352 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms