Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AC091132.4-201ENST00000587960 2262 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 OR52K3P-202ENST00000641797 1729 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 RNU6-171P-201ENST00000384354 107 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 LDHAP1-201ENST00000509421 992 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 SKA2-203ENST00000578105 689 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AC073488.2-201ENST00000631903 751 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AL096711.1-201ENST00000404780 554 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC239367.3-201ENST00000428996 814 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 COPS8P2-201ENST00000473228 627 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 RN7SL104P-201ENST00000498686 293 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 MARK2P4-201ENST00000503381 2380 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 RNA5SP474-201ENST00000391234 90 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC017035.1-201ENST00000411999 1115 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 UQCRHP1-204ENST00000424609 274 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 PSPC1P1-201ENST00000442352 665 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 DUTP7-201ENST00000507982 486 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC073488.9-201ENST00000631601 754 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 AKAP17BP-201ENST00000431706 2719 ntBASIC6.3□□□□□ -1.4
CHD8Q9HCK8 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms