Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 ATP5J2P4-201ENST00000538774 267 ntBASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC233290.1-201ENST00000553021 1186 ntBASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AC021422.1-201ENST00000621212 473 ntBASIC6.09□□□□□ -1.43
DUX4Q9UBX2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DUX4Q9UBX2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.09□□□□□ -1.44
DUX4Q9UBX2 AC083806.2-201ENST00000617795 2685 ntBASIC6.09□□□□□ -1.44
DUX4Q9UBX2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.09□□□□□ -1.44
DUX4Q9UBX2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
DUX4Q9UBX2 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC132219.2-201ENST00000624416 2327 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 TUBBP10-201ENST00000427668 1301 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CDY3P-201ENST00000454543 1618 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 SNORA70.8-201ENST00000384231 136 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 SNORA70.9-201ENST00000384370 135 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 PPIAP30-201ENST00000415473 519 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AL390840.1-201ENST00000420303 988 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC114755.1-201ENST00000453101 868 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC018892.2-201ENST00000457656 693 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC016559.1-201ENST00000511420 199 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC084337.1-201ENST00000524809 686 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 OR5M4P-201ENST00000529436 925 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AL023806.2-201ENST00000603042 263 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC005070.1-201ENST00000603744 365 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AL035417.2-201ENST00000603887 796 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AL136139.1-201ENST00000605568 222 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.08□□□□□ -1.44
DUX4Q9UBX2 ZNF402P-201ENST00000404435 3100 ntBASIC6.08□□□□□ -1.44
DUX4Q9UBX2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 AL591135.1-201ENST00000401578 5914 ntBASIC6.07□□□□□ -1.44
DUX4Q9UBX2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 RNA5SP218-201ENST00000363188 109 ntBASIC6.07□□□□□ -1.44
DUX4Q9UBX2 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 AC090114.1-201ENST00000393266 448 ntBASIC6.07□□□□□ -1.44
DUX4Q9UBX2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DUX4Q9UBX2 OR7E117P-201ENST00000422682 1112 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms