Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TPTE-205ENST00000622113 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC018717.1-201ENST00000457712 1505 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 MTCO1P28-201ENST00000574177 1528 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 RNA5SP333-201ENST00000363466 118 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 RNA5SP334-201ENST00000364825 118 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 RN7SKP27-201ENST00000410684 333 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AL355355.1-201ENST00000442900 793 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 FBXL21-201ENST00000297158 1305 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 GAPDHP57-201ENST00000424400 585 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC023194.2-201ENST00000465398 406 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 SUMO2P17-201ENST00000504438 285 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC092332.1-201ENST00000563684 829 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 MIR3680-2-201ENST00000578247 87 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 MIR3680-1-201ENST00000581433 87 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC048344.3-201ENST00000605512 251 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC017037.4-201ENST00000624526 826 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 MTIF2-204ENST00000403721 2386 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC012213.2-201ENST00000562917 4597 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 MAPK10-357ENST00000641831 2858 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 CAPNS1P1-201ENST00000401029 633 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AL359694.1-201ENST00000403247 604 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 OR52H2P-201ENST00000514607 902 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AP003396.4-201ENST00000527574 265 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC097381.3-201ENST00000608962 462 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 U1.41-201ENST00000617626 165 ntBASIC6.32□□□□□ -1.4
CHD8Q9HCK8 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC6.32□□□□□ -1.4
CHD8Q9HCK8 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AC073349.2-201ENST00000427545 1603 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 AL356800.1-201ENST00000553339 735 ntBASIC6.31□□□□□ -1.4
CHD8Q9HCK8 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.31□□□□□ -1.4
CHD8Q9HCK8 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms