Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.27□□□□□ -0.92
LRCH3Q96II8 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 RNU1-87P-201ENST00000363727 170 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 OR52N3P-201ENST00000413417 934 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 NPM1P36-201ENST00000415681 835 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AL121776.1-201ENST00000429337 372 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 MTCO1P45-201ENST00000431457 267 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 MTCYBP6-201ENST00000441810 138 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC236972.4-201ENST00000458091 963 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 ST13P14-201ENST00000474095 734 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 RN7SL333P-201ENST00000476398 297 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 VPS26AP1-201ENST00000483197 979 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 RN7SL416P-201ENST00000494042 298 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 LRRC34P2-201ENST00000514850 553 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 PTTG3P-201ENST00000521862 606 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 SMARCE1P4-201ENST00000523647 241 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AC233699.1-201ENST00000569955 1168 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 RN7SL237P-201ENST00000580912 287 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AL137798.1-201ENST00000607700 339 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 CR769775.3-201ENST00000610388 219 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AL135999.3-201ENST00000610501 812 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 CARMN-212ENST00000614896 536 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 AP003122.6-201ENST00000623831 495 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 TSHZ2-205ENST00000626626 670 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 ANKRD20A5P-201ENST00000431648 3556 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LRCH3Q96II8 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 CCT5P1-201ENST00000502314 1618 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 ARHGAP25-209ENST00000479844 1933 ntTSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 AP003469.4-201ENST00000565617 2825 ntBASIC9.27□□□□□ -0.93
LRCH3Q96II8 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
LRCH3Q96II8 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 BDNF-216ENST00000532997 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 USP17L8-201ENST00000527080 1593 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 AL391988.1-201ENST00000614747 1553 ntBASIC9.26□□□□□ -0.93
LRCH3Q96II8 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 RN7SKP93-201ENST00000363838 309 ntBASIC9.26□□□□□ -0.93
LRCH3Q96II8 RNU6-931P-201ENST00000363850 107 ntBASIC9.26□□□□□ -0.93
LRCH3Q96II8 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LRCH3Q96II8 PHBP1-201ENST00000392260 808 ntBASIC9.26□□□□□ -0.93
LRCH3Q96II8 RNU2-18P-201ENST00000411224 162 ntBASIC9.26□□□□□ -0.93
LRCH3Q96II8 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC9.26□□□□□ -0.93
LRCH3Q96II8 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms