Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC007537.1-201ENST00000539347 327 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 OR5BK1P-201ENST00000550421 823 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 RPS4XP21-201ENST00000603814 750 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC025287.2-201ENST00000621911 668 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CASC19-232ENST00000641480 1244 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H3F3CQ6NXT2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AP002833.3-201ENST00000625075 2265 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 RN7SKP184-201ENST00000362348 333 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 RNA5SP382-201ENST00000363355 112 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AL353133.1-201ENST00000407695 401 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 PTPN2P1-201ENST00000423212 1072 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AHCYP8-201ENST00000425108 209 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC013403.1-201ENST00000436954 263 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AL356121.1-201ENST00000442911 156 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 NMNAT1P3-201ENST00000457517 888 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AP003385.3-201ENST00000472498 287 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 RN7SL836P-201ENST00000476140 296 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 RN7SL379P-201ENST00000479912 293 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 NACAP5-201ENST00000509863 636 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC093878.1-201ENST00000515630 432 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 OR7E154P-201ENST00000525174 932 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CHEK2P2-201ENST00000554701 672 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 PPIAP6-201ENST00000557078 499 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC011471.4-201ENST00000638271 216 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AL596275.2-208ENST00000641192 594 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 MAPK10-270ENST00000641102 3538 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC004023.1-201ENST00000561473 1744 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 AC087392.3-202ENST00000358446 1754 ntBASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H3F3CQ6NXT2 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
H3F3CQ6NXT2 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms