Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RHBDL3P58872 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.19□□□□□ -1.1
RHBDL3P58872 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.18□□□□□ -1.1
RHBDL3P58872 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 CDY10P-201ENST00000452415 1567 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.18□□□□□ -1.1
RHBDL3P58872 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.18□□□□□ -1.1
RHBDL3P58872 AC107977.1-201ENST00000355745 939 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 RPL9P21-201ENST00000392269 505 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.18□□□□□ -1.1
RHBDL3P58872 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 BX119904.3-201ENST00000428194 957 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 GAPDHP19-201ENST00000431768 1005 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.18□□□□□ -1.1
RHBDL3P58872 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.18□□□□□ -1.1
RHBDL3P58872 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC8.18□□□□□ -1.1
RHBDL3P58872 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.18□□□□□ -1.1
RHBDL3P58872 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 AC025857.1-201ENST00000525252 377 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.18□□□□□ -1.1
RHBDL3P58872 DPPA3P2-202ENST00000557188 1219 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 ULK4P1-202ENST00000565174 503 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 OR7A11P-201ENST00000597719 953 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 AC096586.2-201ENST00000610260 441 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
RHBDL3P58872 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.18□□□□□ -1.1
RHBDL3P58872 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RHBDL3P58872 OR5M2P-202ENST00000641241 4242 ntBASIC8.18□□□□□ -1.1
RHBDL3P58872 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 ZNF806-201ENST00000438300 1774 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AL669831.5-218ENST00000591702 1873 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 UBBP1-201ENST00000392399 473 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.17□□□□□ -1.1
RHBDL3P58872 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.17□□□□□ -1.1
RHBDL3P58872 GAPDHP20-201ENST00000444107 1007 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.17□□□□□ -1.1
RHBDL3P58872 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 RPS10P20-201ENST00000494130 463 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC8.17□□□□□ -1.1
RHBDL3P58872 SNX18P23-201ENST00000510867 677 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 RNU6-1334P-201ENST00000516032 105 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 SNORD116-30-201ENST00000516468 85 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 RN7SKP183-201ENST00000517169 324 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 EEF1B2P2-201ENST00000519625 676 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.17□□□□□ -1.1
RHBDL3P58872 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 OR5BK1P-201ENST00000550421 823 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 AC005519.1-201ENST00000554490 601 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC8.17□□□□□ -1.1
RHBDL3P58872 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC8.17□□□□□ -1.1
RHBDL3P58872 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RHBDL3P58872 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RHBDL3P58872 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RHBDL3P58872 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.17□□□□□ -1.1
RHBDL3P58872 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms