Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXG1P55316 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC244453.4-201ENST00000419150 388 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 CHCHD4P5-201ENST00000436684 427 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC083806.1-201ENST00000468934 316 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 RN7SL655P-201ENST00000486087 298 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 AC026407.1-201ENST00000518369 204 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 OR7E154P-201ENST00000525174 932 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
FOXG1P55316 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXG1P55316 AL035410.2-201ENST00000604963 864 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXG1P55316 MIR6070-201ENST00000613967 103 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
FOXG1P55316 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXG1P55316 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 AC073857.1-201ENST00000625082 1054 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXG1P55316 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
FOXG1P55316 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXG1P55316 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXG1P55316 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXG1P55316 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXG1P55316 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 AC015871.3-201ENST00000618835 2261 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 RN7SKP47-201ENST00000365347 328 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 NPM1P36-201ENST00000415681 835 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 MTND4P11-201ENST00000417020 1058 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 OR51A6P-201ENST00000418680 1004 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
FOXG1P55316 BX119917.1-201ENST00000432517 502 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXG1P55316 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 HMGN1P32-201ENST00000441744 256 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXG1P55316 AC022730.1-201ENST00000473114 568 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 RN7SL259P-201ENST00000478499 253 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 RPS14P8-201ENST00000478778 369 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 AC112225.1-201ENST00000508230 297 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 MTCYBP44-201ENST00000514835 823 ntBASIC6.09□□□□□ -1.43
FOXG1P55316 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.09□□□□□ -1.43
FOXG1P55316 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXG1P55316 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXG1P55316 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms