Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL049541.2-201ENST00000626377 555 ntBASIC7.41□□□□□ -1.22
SSR1P43307 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.41□□□□□ -1.22
SSR1P43307 OR7E161P-202ENST00000641994 1033 ntBASIC7.41□□□□□ -1.22
SSR1P43307 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 AC110597.1-201ENST00000562669 3176 ntBASIC7.41□□□□□ -1.22
SSR1P43307 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SSR1P43307 AC120036.2-201ENST00000509729 1474 ntBASIC7.41□□□□□ -1.22
SSR1P43307 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SSR1P43307 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.41□□□□□ -1.22
SSR1P43307 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 AL139384.2-201ENST00000613809 3590 ntBASIC7.4□□□□□ -1.22
SSR1P43307 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.4□□□□□ -1.22
SSR1P43307 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SSR1P43307 TYMSP1-201ENST00000407851 869 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AC105052.2-201ENST00000434317 794 ntBASIC7.4□□□□□ -1.22
SSR1P43307 PHBP4-201ENST00000437447 837 ntBASIC7.4□□□□□ -1.22
SSR1P43307 HMGN1P6-201ENST00000438508 291 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.4□□□□□ -1.22
SSR1P43307 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.4□□□□□ -1.22
SSR1P43307 SNORA81.1-201ENST00000458922 177 ntBASIC7.4□□□□□ -1.22
SSR1P43307 RPL23AP8-201ENST00000479812 475 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AC026826.1-201ENST00000493002 361 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.4□□□□□ -1.22
SSR1P43307 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.4□□□□□ -1.22
SSR1P43307 AC061975.3-201ENST00000583209 244 ntBASIC7.4□□□□□ -1.22
SSR1P43307 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.4□□□□□ -1.22
SSR1P43307 AC006116.6-201ENST00000593258 1103 ntBASIC7.4□□□□□ -1.22
SSR1P43307 PRR13P5-201ENST00000596581 442 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AC005070.1-201ENST00000603744 365 ntBASIC7.4□□□□□ -1.22
SSR1P43307 LSM1P2-201ENST00000604911 322 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.4□□□□□ -1.22
SSR1P43307 AL139123.1-201ENST00000612008 430 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AL352984.2-202ENST00000613699 155 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AC004943.1-203ENST00000624370 1074 ntBASIC7.4□□□□□ -1.22
SSR1P43307 AL355480.4-201ENST00000626823 69 ntBASIC7.4□□□□□ -1.22
SSR1P43307 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.4□□□□□ -1.22
SSR1P43307 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SSR1P43307 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.4□□□□□ -1.22
SSR1P43307 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.4□□□□□ -1.22
SSR1P43307 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.4□□□□□ -1.22
SSR1P43307 CDY10P-201ENST00000452415 1567 ntBASIC7.4□□□□□ -1.22
SSR1P43307 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.4□□□□□ -1.22
SSR1P43307 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SSR1P43307 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.4□□□□□ -1.23
SSR1P43307 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SSR1P43307 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SSR1P43307 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SSR1P43307 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
SSR1P43307 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.39□□□□□ -1.23
SSR1P43307 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.39□□□□□ -1.23
SSR1P43307 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.39□□□□□ -1.23
SSR1P43307 AL356361.1-201ENST00000400943 1459 ntBASIC7.39□□□□□ -1.23
SSR1P43307 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.39□□□□□ -1.23
SSR1P43307 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.39□□□□□ -1.23
SSR1P43307 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
SSR1P43307 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SSR1P43307 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.39□□□□□ -1.23
SSR1P43307 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.39□□□□□ -1.23
SSR1P43307 RNU2-5P-201ENST00000410533 180 ntBASIC7.39□□□□□ -1.23
SSR1P43307 RN7SKP85-201ENST00000411349 318 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 EIF4A1P13-201ENST00000415667 230 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.39□□□□□ -1.23
SSR1P43307 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 VDAC2P3-201ENST00000430995 828 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 AC135721.2-201ENST00000464237 300 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AC018475.1-201ENST00000478358 465 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AC079594.1-201ENST00000489757 331 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 CHCHD2P7-201ENST00000508008 452 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC7.39□□□□□ -1.23
SSR1P43307 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC7.39□□□□□ -1.23
SSR1P43307 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SSR1P43307 EEF1B2P1-201ENST00000567221 672 ntBASIC7.39□□□□□ -1.23
SSR1P43307 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.39□□□□□ -1.23
SSR1P43307 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SSR1P43307 PRR13P3-201ENST00000603578 376 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AC063962.1-201ENST00000608199 521 ntBASIC7.39□□□□□ -1.23
SSR1P43307 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms