Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.38□□□□□ -1.23
RB1P06400 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RB1P06400 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RB1P06400 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 DLEU2L-201ENST00000371086 3555 ntBASIC7.38□□□□□ -1.23
RB1P06400 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.38□□□□□ -1.23
RB1P06400 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.38□□□□□ -1.23
RB1P06400 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 LINC01613-201ENST00000561476 2780 ntBASIC7.37□□□□□ -1.23
RB1P06400 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 SAMMSON-222ENST00000641901 2727 ntBASIC7.37□□□□□ -1.23
RB1P06400 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
RB1P06400 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.37□□□□□ -1.23
RB1P06400 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 PSMA6P1-201ENST00000400275 741 ntBASIC7.37□□□□□ -1.23
RB1P06400 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.37□□□□□ -1.23
RB1P06400 AL121578.1-201ENST00000428051 892 ntBASIC7.37□□□□□ -1.23
RB1P06400 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.37□□□□□ -1.23
RB1P06400 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.37□□□□□ -1.23
RB1P06400 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.37□□□□□ -1.23
RB1P06400 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 CT45A11P-201ENST00000448043 1134 ntBASIC7.37□□□□□ -1.23
RB1P06400 PRDX1P1-201ENST00000449329 596 ntBASIC7.37□□□□□ -1.23
RB1P06400 NUCKS1P1-201ENST00000452067 703 ntBASIC7.37□□□□□ -1.23
RB1P06400 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.37□□□□□ -1.23
RB1P06400 RN7SL413P-201ENST00000482700 297 ntBASIC7.37□□□□□ -1.23
RB1P06400 AC018797.1-201ENST00000510791 255 ntBASIC7.37□□□□□ -1.23
RB1P06400 AC026774.2-201ENST00000513990 1098 ntBASIC7.37□□□□□ -1.23
RB1P06400 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.37□□□□□ -1.23
RB1P06400 AC007068.2-201ENST00000543168 395 ntBASIC7.37□□□□□ -1.23
RB1P06400 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.37□□□□□ -1.23
RB1P06400 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.37□□□□□ -1.23
RB1P06400 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.37□□□□□ -1.23
RB1P06400 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.37□□□□□ -1.23
RB1P06400 AC119674.1-201ENST00000641611 1210 ntBASIC7.37□□□□□ -1.23
RB1P06400 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RB1P06400 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.37□□□□□ -1.23
RB1P06400 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.37□□□□□ -1.23
RB1P06400 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RB1P06400 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RB1P06400 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.36□□□□□ -1.23
RB1P06400 THAP12P7-201ENST00000520248 2290 ntBASIC7.36□□□□□ -1.23
RB1P06400 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.36□□□□□ -1.23
RB1P06400 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RB1P06400 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.36□□□□□ -1.23
RB1P06400 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.36□□□□□ -1.23
RB1P06400 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 RN7SKP129-201ENST00000410288 299 ntBASIC7.36□□□□□ -1.23
RB1P06400 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RB1P06400 KCTD9P1-201ENST00000430462 1167 ntBASIC7.36□□□□□ -1.23
RB1P06400 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.36□□□□□ -1.23
RB1P06400 ARMC4P1-201ENST00000438905 707 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC114755.4-201ENST00000439114 443 ntBASIC7.36□□□□□ -1.23
RB1P06400 COL11A2P1-205ENST00000441798 676 ntBASIC7.36□□□□□ -1.23
RB1P06400 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.36□□□□□ -1.23
RB1P06400 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.36□□□□□ -1.23
RB1P06400 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.36□□□□□ -1.23
RB1P06400 RPL12P24-201ENST00000474907 486 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC005017.1-201ENST00000482002 490 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC021006.1-201ENST00000489849 553 ntBASIC7.36□□□□□ -1.23
RB1P06400 RN7SL362P-201ENST00000494228 267 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC113367.2-201ENST00000505749 160 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC091874.2-201ENST00000505889 720 ntBASIC7.36□□□□□ -1.23
RB1P06400 SNX18P23-201ENST00000510867 677 ntBASIC7.36□□□□□ -1.23
RB1P06400 SNORA74.1-201ENST00000516320 180 ntBASIC7.36□□□□□ -1.23
RB1P06400 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms