Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 PMS2P9-201ENST00000441237 515 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 AL359839.1-201ENST00000451975 1160 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC009879.1-201ENST00000520029 839 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC005632.2-201ENST00000564271 828 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 MIR6886-201ENST00000619864 61 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 SNX18P12-201ENST00000624821 759 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 Z97989.1-201ENST00000531702 2421 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 HCG18-244ENST00000602516 2890 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 PAICSP2-201ENST00000429118 1150 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC110602.1-201ENST00000437414 318 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 COX6B1P4-201ENST00000519826 484 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC090826.1-203ENST00000569235 490 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 RN7SL366P-201ENST00000577957 292 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 AP000894.4-201ENST00000610185 483 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 AC073488.9-201ENST00000631601 754 ntBASIC8.19□□□□□ -1.1
SNED1Q8TER0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.19□□□□□ -1.1
SNED1Q8TER0 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SNED1Q8TER0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 RN7SKP78-201ENST00000364711 318 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 LYPLA1P3-201ENST00000402650 695 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 FTH1P20-201ENST00000434913 548 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SNED1Q8TER0 RN7SL101P-201ENST00000496350 279 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 SSX8-201ENST00000506270 579 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 FXNP1-201ENST00000555153 337 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 MIR3614-201ENST00000581261 86 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.18□□□□□ -1.1
SNED1Q8TER0 AL080312.2-201ENST00000613001 630 ntBASIC8.18□□□□□ -1.1
SNED1Q8TER0 AL596244.1-201ENST00000567068 3779 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms