Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXD12P35452 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXD12P35452 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXD12P35452 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.18□□□□□ -1.26
HOXD12P35452 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.18□□□□□ -1.26
HOXD12P35452 CLUHP10-201ENST00000631979 980 ntBASIC7.18□□□□□ -1.26
HOXD12P35452 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXD12P35452 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXD12P35452 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXD12P35452 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXD12P35452 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXD12P35452 AL359694.2-201ENST00000567753 1615 ntBASIC7.18□□□□□ -1.26
HOXD12P35452 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXD12P35452 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXD12P35452 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXD12P35452 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HOXD12P35452 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXD12P35452 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HOXD12P35452 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HOXD12P35452 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 RN7SKP187-201ENST00000365536 330 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AC092634.1-201ENST00000366505 199 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 RN7SKP85-201ENST00000411349 318 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD12P35452 AK3P5-201ENST00000432033 519 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AL354893.1-201ENST00000433735 348 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXD12P35452 RPS18P1-201ENST00000447840 458 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD12P35452 AC096754.1-201ENST00000508904 818 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 RNU6-1334P-201ENST00000516032 105 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AC100854.1-201ENST00000520351 341 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AC021820.1-201ENST00000525564 808 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
HOXD12P35452 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD12P35452 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXD12P35452 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXD12P35452 MIR4312-201ENST00000579909 76 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AC019257.2-201ENST00000605539 497 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 AL359091.2-201ENST00000609303 556 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 AC022960.2-201ENST00000616300 666 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXD12P35452 TMEM14EP-202ENST00000639378 1296 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.17□□□□□ -1.26
HOXD12P35452 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXD12P35452 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HOXD12P35452 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXD12P35452 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXD12P35452 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXD12P35452 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD12P35452 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXD12P35452 AC004023.1-201ENST00000561473 1744 ntBASIC7.16□□□□□ -1.26
HOXD12P35452 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD12P35452 SNX18P3-202ENST00000565670 1750 ntBASIC7.16□□□□□ -1.26
HOXD12P35452 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HOXD12P35452 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD12P35452 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXD12P35452 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HOXD12P35452 RPL12P1-201ENST00000374520 498 ntBASIC7.16□□□□□ -1.26
HOXD12P35452 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXD12P35452 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 360.9 ms