Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
COL4A5P29400 AC026464.2-201ENST00000567834 2421 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 AC079949.2-201ENST00000617117 2933 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
COL4A5P29400 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 AC093225.1-201ENST00000506867 1408 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 EDA-213ENST00000616899 4643 ntTSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 RNA5SP477-201ENST00000362639 119 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 RNA5SP510-201ENST00000364697 99 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.94□□□□□ -1.14
COL4A5P29400 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.94□□□□□ -1.14
COL4A5P29400 AC239367.3-201ENST00000428996 814 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 CLUHP1-201ENST00000435012 1190 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.94□□□□□ -1.14
COL4A5P29400 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 AC011352.2-201ENST00000514574 1016 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 SNORD46.2-201ENST00000516021 102 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 FXNP1-201ENST00000555153 337 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.94□□□□□ -1.14
COL4A5P29400 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.94□□□□□ -1.14
COL4A5P29400 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
COL4A5P29400 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 AC074141.1-201ENST00000588129 2995 ntBASIC7.94□□□□□ -1.14
COL4A5P29400 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
COL4A5P29400 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
COL4A5P29400 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL4A5P29400 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.93□□□□□ -1.14
COL4A5P29400 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
COL4A5P29400 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.93□□□□□ -1.14
COL4A5P29400 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.93□□□□□ -1.14
COL4A5P29400 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.93□□□□□ -1.14
COL4A5P29400 RBMY2AP-201ENST00000445405 1157 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 RBMY2CP-201ENST00000448575 1157 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 RBMY2DP-202ENST00000448881 1157 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 TVP23CP1-201ENST00000450317 639 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 RBMY2BP-202ENST00000451071 1156 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.93□□□□□ -1.14
COL4A5P29400 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.93□□□□□ -1.14
COL4A5P29400 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.93□□□□□ -1.14
COL4A5P29400 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.93□□□□□ -1.14
COL4A5P29400 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.93□□□□□ -1.14
COL4A5P29400 AC073389.3-201ENST00000609434 935 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 AC008555.1-201ENST00000561778 2757 ntBASIC7.93□□□□□ -1.14
COL4A5P29400 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL4A5P29400 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 RNA5SP273-201ENST00000362484 113 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 RN7SKP144-201ENST00000411108 279 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL4A5P29400 AC003989.1-201ENST00000434569 565 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL4A5P29400 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.92□□□□□ -1.14
COL4A5P29400 UBFD1P1-201ENST00000473259 814 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AL158068.1-201ENST00000506116 616 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC022826.1-201ENST00000519383 805 ntBASIC7.92□□□□□ -1.14
COL4A5P29400 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
COL4A5P29400 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
COL4A5P29400 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms