Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 SNRPCP6-201ENST00000528310 210 ntBASIC9.79□□□□□ -0.84
SIN3AQ96ST3 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 AL591222.2-201ENST00000604443 754 ntBASIC9.79□□□□□ -0.84
SIN3AQ96ST3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
SIN3AQ96ST3 AC004023.1-201ENST00000561473 1744 ntBASIC9.79□□□□□ -0.84
SIN3AQ96ST3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 RNU1-55P-201ENST00000365510 158 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 UBBP1-201ENST00000392399 473 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 GAPDHP57-201ENST00000424400 585 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 OR52H2P-201ENST00000514607 902 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AL445383.1-201ENST00000554689 874 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 OR4C49P-201ENST00000563891 900 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AC127071.2-201ENST00000623293 527 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 AL354702.2-202ENST00000641481 890 ntBASIC9.78□□□□□ -0.84
SIN3AQ96ST3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SIN3AQ96ST3 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SIN3AQ96ST3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC9.77□□□□□ -0.84
SIN3AQ96ST3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SIN3AQ96ST3 AC010132.4-201ENST00000569883 1368 ntBASIC9.77□□□□□ -0.84
SIN3AQ96ST3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SIN3AQ96ST3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 RNA5SP308-201ENST00000362532 115 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 BMS1P11-201ENST00000442351 885 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 PPIAP32-201ENST00000449940 472 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 BMS1P9-201ENST00000457640 885 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC091849.1-201ENST00000509920 121 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 OR5BK1P-201ENST00000550421 823 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC091768.1-201ENST00000609258 930 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 PSMC1P6-201ENST00000477233 1319 ntBASIC9.77□□□□□ -0.85
SIN3AQ96ST3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SIN3AQ96ST3 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SIN3AQ96ST3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms