Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP1S3Q96PC3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP1S3Q96PC3 AL157713.1-201ENST00000379752 1531 ntBASIC5.18□□□□□ -1.58
AP1S3Q96PC3 AL121949.2-201ENST00000403446 1548 ntBASIC5.18□□□□□ -1.58
AP1S3Q96PC3 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 BRD7P1-201ENST00000557705 1915 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 RNA5SP71-201ENST00000362967 126 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 RN7SKP211-201ENST00000363328 315 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 HMGB1P39-201ENST00000366304 880 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 SNX18P14-201ENST00000429308 574 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 HMGN1P6-201ENST00000438508 291 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC016144.1-201ENST00000548175 1087 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC136944.5-201ENST00000573021 151 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 APOC2-204ENST00000591597 447 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC063962.1-201ENST00000608199 521 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AC068769.1-201ENST00000474767 2426 ntBASIC5.17□□□□□ -1.58
AP1S3Q96PC3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP1S3Q96PC3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 RPL10P16-201ENST00000325000 645 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 PTMAP8-201ENST00000397729 342 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.16□□□□□ -1.58
AP1S3Q96PC3 AC009413.1-201ENST00000414823 399 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 MTND6P1-201ENST00000417434 424 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 PSMC1P2-201ENST00000423961 1204 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 RPL34P27-201ENST00000428810 349 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 FAF2P1-201ENST00000429974 1298 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 HMGN2P24-201ENST00000433516 273 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 CDK7P1-201ENST00000434574 693 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 AL451136.1-201ENST00000435399 325 ntBASIC5.16□□□□□ -1.58
AP1S3Q96PC3 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms