Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC010332.1-201ENST00000620439 97 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 MIR3191-201ENST00000636300 76 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 BRD7P2-201ENST00000466133 1944 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 CCAT2-201ENST00000630920 1752 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 BMS1P1-201ENST00000374336 1332 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 ACTBP13-201ENST00000423971 3959 ntBASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC9.01□□□□□ -0.97
SCUBE3Q8IX30 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC125238.2-201ENST00000430003 1440 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 RNA5SP78-201ENST00000364622 118 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 ARF1P1-201ENST00000406466 544 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 RN7SKP285-201ENST00000410137 318 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 RN7SKP181-201ENST00000411188 316 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC064862.3-201ENST00000411435 571 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL139421.1-201ENST00000423010 169 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL513174.1-201ENST00000423182 629 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 FAF2P1-201ENST00000429974 1298 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ATP5A1P7-201ENST00000453978 1279 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 GTF2IP12-201ENST00000456547 356 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 RPL35AP19-201ENST00000469425 329 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC096743.1-201ENST00000485172 319 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC093824.1-201ENST00000508796 343 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 NPM1P52-201ENST00000518264 846 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC124947.2-202ENST00000552735 133 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL352979.3-201ENST00000553515 247 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC002059.1-201ENST00000608014 477 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AL357080.1-201ENST00000617394 239 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 MIR6807-201ENST00000621968 92 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 AC027176.3-201ENST00000624460 586 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 OR5AU1-204ENST00000641822 1197 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 HK1-203ENST00000360289 3961 ntTSL 5 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 NF1P1-201ENST00000604105 2645 ntBASIC9□□□□□ -0.97
SCUBE3Q8IX30 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC9□□□□□ -0.97
SCUBE3Q8IX30 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC9□□□□□ -0.97
SCUBE3Q8IX30 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 HERC2P8-202ENST00000564334 3705 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms