Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 SNORA70.8-201ENST00000384231 136 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 AL139415.1-201ENST00000424862 352 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 NPM1P30-201ENST00000425092 828 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
AP3S2P59780 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 RN7SL149P-201ENST00000465197 281 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 RN7SL505P-201ENST00000482644 293 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 OR7E163P-201ENST00000505943 894 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC5.84□□□□□ -1.47
AP3S2P59780 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC5.84□□□□□ -1.47
AP3S2P59780 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 RN7SL49P-201ENST00000581392 298 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.84□□□□□ -1.47
AP3S2P59780 AC006335.3-201ENST00000613408 292 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 AC106795.5-201ENST00000623288 454 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 AC127071.1-201ENST00000624997 712 ntBASIC5.84□□□□□ -1.47
AP3S2P59780 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AP3S2P59780 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
AP3S2P59780 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.84□□□□□ -1.47
AP3S2P59780 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
AP3S2P59780 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
AP3S2P59780 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.84□□□□□ -1.48
AP3S2P59780 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
AP3S2P59780 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
AP3S2P59780 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
AP3S2P59780 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
AP3S2P59780 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.83□□□□□ -1.48
AP3S2P59780 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
AP3S2P59780 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 RPL12P1-201ENST00000374520 498 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AMELY-202ENST00000383036 621 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 PTMAP8-201ENST00000397729 342 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC5.83□□□□□ -1.48
AP3S2P59780 RPL34P27-201ENST00000428810 349 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.83□□□□□ -1.48
AP3S2P59780 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC5.83□□□□□ -1.48
AP3S2P59780 OR51P1P-201ENST00000447547 942 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AC007000.1-201ENST00000453064 794 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 SULT1D1P-201ENST00000458020 882 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC128716.1-201ENST00000475129 166 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AC079944.1-201ENST00000485426 495 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.83□□□□□ -1.48
AP3S2P59780 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.83□□□□□ -1.48
AP3S2P59780 AP000619.1-201ENST00000540293 1000 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 DCN-207ENST00000546370 586 ntTSL 3 BASIC5.83□□□□□ -1.48
AP3S2P59780 AL355076.3-201ENST00000555838 587 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.83□□□□□ -1.48
AP3S2P59780 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 AC103974.2-201ENST00000611319 778 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AL352984.2-202ENST00000613699 155 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AC012653.2-201ENST00000621880 420 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC5.83□□□□□ -1.48
AP3S2P59780 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.83□□□□□ -1.48
AP3S2P59780 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 SOCS5P5-201ENST00000402732 1586 ntBASIC5.83□□□□□ -1.48
AP3S2P59780 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.83□□□□□ -1.48
AP3S2P59780 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AP3S2P59780 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms