Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC11.84□□□□□ -0.51
SMARCA4P51532 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SMARCA4P51532 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SMARCA4P51532 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC11.84□□□□□ -0.51
SMARCA4P51532 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SMARCA4P51532 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
SMARCA4P51532 VTRNA3-1P-201ENST00000362552 102 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 RN7SKP144-201ENST00000411108 279 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 AL663061.1-201ENST00000416625 580 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 RPL12P16-201ENST00000431098 498 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 IGHVIII-67-4-201ENST00000524281 296 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 MED21-206ENST00000546323 575 ntTSL 3 BASIC11.84□□□□□ -0.51
SMARCA4P51532 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC11.84□□□□□ -0.51
SMARCA4P51532 AC068305.2-201ENST00000550567 1205 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC11.84□□□□□ -0.51
SMARCA4P51532 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC11.84□□□□□ -0.51
SMARCA4P51532 AC068768.2-201ENST00000602352 343 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 IGKV2OR2-10-201ENST00000613976 311 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 AL136984.1-201ENST00000607611 1893 ntBASIC11.84□□□□□ -0.51
SMARCA4P51532 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC11.84□□□□□ -0.51
SMARCA4P51532 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SMARCA4P51532 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SMARCA4P51532 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC11.83□□□□□ -0.51
SMARCA4P51532 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SMARCA4P51532 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SMARCA4P51532 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SMARCA4P51532 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SMARCA4P51532 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC11.83□□□□□ -0.52
SMARCA4P51532 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC11.83□□□□□ -0.52
SMARCA4P51532 AC239367.3-201ENST00000428996 814 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 PABPC1P1-201ENST00000506347 591 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 OR4D12P-201ENST00000509361 911 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC11.83□□□□□ -0.52
SMARCA4P51532 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SMARCA4P51532 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC11.83□□□□□ -0.52
SMARCA4P51532 MRPS21P8-201ENST00000569196 235 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 AC005277.2-201ENST00000617898 390 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SMARCA4P51532 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC11.83□□□□□ -0.52
SMARCA4P51532 AC084782.1-201ENST00000564401 2465 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC11.83□□□□□ -0.52
SMARCA4P51532 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 AC125603.4-201ENST00000621942 2699 ntBASIC11.83□□□□□ -0.52
SMARCA4P51532 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SMARCA4P51532 RNA5SP346-201ENST00000363541 121 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 RN7SKP81-201ENST00000365603 331 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SMARCA4P51532 RPL5P5-201ENST00000392009 893 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 RPL5P9-201ENST00000448118 886 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 AC016144.1-201ENST00000548175 1087 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 OTX2-203ENST00000554559 715 ntTSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 AL591767.3-201ENST00000554632 525 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC11.82□□□□□ -0.52
SMARCA4P51532 AC106785.4-201ENST00000569492 412 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 AC087575.1-201ENST00000585087 229 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SMARCA4P51532 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 AC018717.1-201ENST00000457712 1505 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 CREM-203ENST00000344351 1625 ntTSL 2 BASIC11.82□□□□□ -0.52
SMARCA4P51532 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC11.82□□□□□ -0.52
SMARCA4P51532 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 RN7SKP292-201ENST00000365522 317 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 RNA5SP284-201ENST00000384547 118 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SMARCA4P51532 AC110749.1-201ENST00000462007 357 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 SNORD46.2-201ENST00000516021 102 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC11.82□□□□□ -0.52
SMARCA4P51532 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC11.82□□□□□ -0.52
SMARCA4P51532 NATP-201ENST00000523491 878 ntBASIC11.82□□□□□ -0.52
SMARCA4P51532 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC11.82□□□□□ -0.52
SMARCA4P51532 RN7SL208P-201ENST00000577964 296 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms