Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 BX119917.1-201ENST00000432517 502 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AC092106.2-201ENST00000436597 487 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGA1P17096 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 RN7SL568P-201ENST00000493069 298 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 AL390198.2-201ENST00000510553 222 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGA1P17096 AC016144.1-201ENST00000548175 1087 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 FXNP1-201ENST00000555153 337 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 GTF2IP6-201ENST00000583143 541 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AC245052.7-201ENST00000601161 359 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AC012175.1-201ENST00000603755 531 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 WBP1LP12-201ENST00000604449 331 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AL359091.2-201ENST00000609303 556 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 AC089999.3-201ENST00000622440 577 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGA1P17096 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGA1P17096 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 Z97989.1-201ENST00000531702 2421 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HMGA1P17096 RNU1-55P-201ENST00000365510 158 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 AL139184.1-202ENST00000422303 222 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.05□□□□□ -1.28
HMGA1P17096 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 UBBP5-201ENST00000446970 266 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 AC093664.1-201ENST00000511779 289 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.05□□□□□ -1.28
HMGA1P17096 AC026956.1-201ENST00000558741 396 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 CD200-202ENST00000383681 1997 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 AC020658.2-201ENST00000559030 4020 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 AC090181.3-201ENST00000624777 1514 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 PPBPP2-201ENST00000513150 1362 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 MAPK10-357ENST00000641831 2858 ntBASIC7.05□□□□□ -1.28
HMGA1P17096 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.05□□□□□ -1.28
HMGA1P17096 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.05□□□□□ -1.28
HMGA1P17096 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HMGA1P17096 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms