Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 NMNAT1P3-201ENST00000457517 888 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 RPSAP48-201ENST00000466509 889 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC126615.1-201ENST00000470084 630 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 PPP1R2P6-201ENST00000478565 588 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC004232.1-201ENST00000571388 208 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC139493.1-201ENST00000604368 397 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC091768.1-201ENST00000609258 930 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AC025287.2-201ENST00000621911 668 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AP000577.1-201ENST00000624366 878 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AL049541.2-201ENST00000626377 555 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 OR8A1-204ENST00000642111 1145 ntBASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RSPO3Q9BXY4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL359694.2-201ENST00000567753 1615 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 Z97989.1-201ENST00000531702 2421 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 MIR541-201ENST00000401360 84 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL359633.1-201ENST00000421403 310 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL138479.1-201ENST00000426913 484 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 CRYGGP-201ENST00000443337 145 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC092421.1-201ENST00000448148 418 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL928654.1-201ENST00000476081 354 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 RN7SL187P-201ENST00000495587 303 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 NDUFA3P2-201ENST00000531434 232 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC092375.1-201ENST00000550410 637 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 MIR4428-201ENST00000584884 73 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AL359704.2-201ENST00000604335 521 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC004908.1-201ENST00000606572 541 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 AC005618.1-201ENST00000606901 3148 ntBASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO3Q9BXY4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 AC119674.1-204ENST00000641348 1343 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO3Q9BXY4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 443.5 ms