Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PHC3Q8NDX5 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 PAICSP1-201ENST00000425324 1217 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 VN1R108P-201ENST00000431580 830 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC096638.2-201ENST00000434965 711 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 ZNF886P-201ENST00000450781 723 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 YAP1P2-201ENST00000455104 610 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC063955.1-201ENST00000462872 685 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RN7SL740P-201ENST00000467060 344 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC105918.1-201ENST00000474399 838 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RN7SL416P-201ENST00000494042 298 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC010486.2-201ENST00000505572 483 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 Z99943.2-201ENST00000507585 266 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 OR4N1P-201ENST00000554847 949 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 MIR3187-201ENST00000583431 70 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC010503.3-201ENST00000594355 540 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RN7SL840P-201ENST00000606883 284 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RN7SL3-201ENST00000610674 299 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 RNVU1-19-201ENST00000613023 167 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 VN1R9P-201ENST00000614184 867 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.8□□□□□ -1.16
PHC3Q8NDX5 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.8□□□□□ -1.16
PHC3Q8NDX5 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms