Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 BX510359.3-201ENST00000422168 306 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.01□□□□□ -1.13
COL4A5P29400 AC094019.1-201ENST00000434678 472 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 BMS1P10-201ENST00000443754 1120 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AC110749.1-201ENST00000462007 357 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AC021220.1-201ENST00000507445 630 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC8.01□□□□□ -1.13
COL4A5P29400 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.01□□□□□ -1.13
COL4A5P29400 AC060775.1-201ENST00000518241 520 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AP005136.2-201ENST00000583253 1049 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.01□□□□□ -1.13
COL4A5P29400 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.01□□□□□ -1.13
COL4A5P29400 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.01□□□□□ -1.13
COL4A5P29400 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8□□□□□ -1.13
COL4A5P29400 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8□□□□□ -1.13
COL4A5P29400 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8□□□□□ -1.13
COL4A5P29400 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 AC006141.1-201ENST00000581917 2170 ntBASIC8□□□□□ -1.13
COL4A5P29400 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8□□□□□ -1.13
COL4A5P29400 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8□□□□□ -1.13
COL4A5P29400 RBBP4P4-201ENST00000398588 1289 ntBASIC8□□□□□ -1.13
COL4A5P29400 AL096800.1-201ENST00000405326 893 ntBASIC8□□□□□ -1.13
COL4A5P29400 AL139805.1-201ENST00000407837 289 ntBASIC8□□□□□ -1.13
COL4A5P29400 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8□□□□□ -1.13
COL4A5P29400 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8□□□□□ -1.13
COL4A5P29400 AC008429.2-201ENST00000523057 864 ntBASIC8□□□□□ -1.13
COL4A5P29400 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 AC008055.1-201ENST00000547032 609 ntBASIC8□□□□□ -1.13
COL4A5P29400 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8□□□□□ -1.13
COL4A5P29400 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8□□□□□ -1.13
COL4A5P29400 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8□□□□□ -1.13
COL4A5P29400 AC008507.3-201ENST00000585753 472 ntBASIC8□□□□□ -1.13
COL4A5P29400 AC011445.2-201ENST00000599274 173 ntBASIC8□□□□□ -1.13
COL4A5P29400 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 AC008555.7-201ENST00000605008 583 ntBASIC8□□□□□ -1.13
COL4A5P29400 FAM72A-208ENST00000607379 1139 ntBASIC8□□□□□ -1.13
COL4A5P29400 Six3os1_4.1-201ENST00000615706 324 ntBASIC8□□□□□ -1.13
COL4A5P29400 AC004801.6-201ENST00000616571 978 ntBASIC8□□□□□ -1.13
COL4A5P29400 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
COL4A5P29400 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8□□□□□ -1.13
COL4A5P29400 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL4A5P29400 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL4A5P29400 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 AC009108.3-201ENST00000602739 3515 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 AC087752.1-201ENST00000391360 558 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 AC016769.2-201ENST00000414815 475 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 AC010240.2-201ENST00000445363 1205 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 PPIAP27-201ENST00000453800 265 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.99□□□□□ -1.13
COL4A5P29400 AC008945.1-201ENST00000505144 499 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 RNA5SP340-201ENST00000517132 107 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.99□□□□□ -1.13
COL4A5P29400 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
COL4A5P29400 AC020978.7-201ENST00000575953 1187 ntBASIC7.99□□□□□ -1.13
COL4A5P29400 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms