Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX49Q9Y6V7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DDX49Q9Y6V7 AC010980.2-201ENST00000587099 1412 ntBASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 AC098818.2-201ENST00000564925 2320 ntBASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DDX49Q9Y6V7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 AL512625.2-201ENST00000417533 625 ntBASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 AC092118.2-201ENST00000613495 667 ntBASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
DDX49Q9Y6V7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DDX49Q9Y6V7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 AL355472.2-201ENST00000422958 438 ntBASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 FAM201B-201ENST00000458407 597 ntBASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 RARRES2P4-201ENST00000514074 484 ntBASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 AL591742.1-201ENST00000604433 565 ntBASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX49Q9Y6V7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 MYC-209ENST00000641252 345 ntBASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX49Q9Y6V7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 TCF3P1-201ENST00000423021 1937 ntBASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX49Q9Y6V7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms