Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 GCSHP5-201ENST00000443090 522 ntBASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 AL158047.1-201ENST00000445918 881 ntBASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 C1QBPP2-201ENST00000528754 825 ntBASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 KRT16P6-202ENST00000425692 1426 ntBASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
SNX9Q9Y5X1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.34■■□□□ 1.01
SNX9Q9Y5X1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 RPPH1-201ENST00000516869 333 ntBASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.33■■□□□ 1.01
SNX9Q9Y5X1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.33■■□□□ 1
SNX9Q9Y5X1 AL391422.3-201ENST00000603791 2761 ntBASIC21.33■■□□□ 1
SNX9Q9Y5X1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SNX9Q9Y5X1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SNX9Q9Y5X1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.32■■□□□ 1
SNX9Q9Y5X1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.32■■□□□ 1
SNX9Q9Y5X1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.32■■□□□ 1
SNX9Q9Y5X1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SNX9Q9Y5X1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.32■■□□□ 1
SNX9Q9Y5X1 AL359736.2-201ENST00000621992 437 ntBASIC21.32■■□□□ 1
SNX9Q9Y5X1 AL023875.1-201ENST00000640777 796 ntBASIC21.32■■□□□ 1
SNX9Q9Y5X1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.32■■□□□ 1
SNX9Q9Y5X1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 BX119927.1-201ENST00000636596 1552 ntBASIC21.31■■□□□ 1
SNX9Q9Y5X1 AL162377.1-201ENST00000618844 1793 ntBASIC21.31■■□□□ 1
SNX9Q9Y5X1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.31■■□□□ 1
SNX9Q9Y5X1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.31■■□□□ 1
SNX9Q9Y5X1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 AL121829.2-201ENST00000620908 328 ntBASIC21.31■■□□□ 1
SNX9Q9Y5X1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.31■■□□□ 1
SNX9Q9Y5X1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.31■■□□□ 1
SNX9Q9Y5X1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.31■■□□□ 1
SNX9Q9Y5X1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNX9Q9Y5X1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SNX9Q9Y5X1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.3■■□□□ 1
SNX9Q9Y5X1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX9Q9Y5X1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.3■■□□□ 1
SNX9Q9Y5X1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SNX9Q9Y5X1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX9Q9Y5X1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNX9Q9Y5X1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.3■■□□□ 1
SNX9Q9Y5X1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNX9Q9Y5X1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.3■■□□□ 1
SNX9Q9Y5X1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms