Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA6Q9Y5G7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA6Q9Y5G7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 MIR4497-201ENST00000583208 89 ntBASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGA6Q9Y5G7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms