Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 AL121829.2-201ENST00000620908 328 ntBASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA9Q9Y5G4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHGA9Q9Y5G4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PCDHGA9Q9Y5G4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA9Q9Y5G4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 TSPY15P-201ENST00000457163 923 ntBASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA9Q9Y5G4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 AL353807.1-201ENST00000427475 662 ntBASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA9Q9Y5G4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 AC023632.3-201ENST00000521633 145 ntBASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 AC026471.5-201ENST00000615068 467 ntBASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHGA9Q9Y5G4 LINC01006-201ENST00000333319 2292 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms