Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AC020907.5-201ENST00000624372 1936 ntBASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 SOX15-203ENST00000570788 1093 ntBASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB11Q9Y5F2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHB11Q9Y5F2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB11Q9Y5F2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 AC073912.3-201ENST00000624414 853 ntBASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB11Q9Y5F2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms