Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB2Q9Y5E7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 AC020907.5-201ENST00000624372 1936 ntBASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 PTBP1P-201ENST00000554374 1601 ntBASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 PRKY-204ENST00000533551 1019 ntBASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 AC092667.1-201ENST00000434301 2586 ntBASIC21.84■■□□□ 1.09
PCDHB2Q9Y5E7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 SNORA78-201ENST00000459373 127 ntBASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 AL121829.2-201ENST00000620908 328 ntBASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB2Q9Y5E7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB2Q9Y5E7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB2Q9Y5E7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHB2Q9Y5E7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB2Q9Y5E7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 RPS2P55-201ENST00000397318 883 ntBASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 AC012618.2-201ENST00000428058 849 ntBASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 AC107956.1-201ENST00000494359 873 ntBASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 AC233702.5-201ENST00000584107 538 ntBASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB2Q9Y5E7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHB2Q9Y5E7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHB2Q9Y5E7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms