Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 NBPF21P-201ENST00000425093 1451 ntBASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LINC00588Q9Y4M8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 SMG8-203ENST00000578922 2178 ntBASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 KRT16P6-202ENST00000425692 1426 ntBASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 RPS2P55-201ENST00000397318 883 ntBASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 AC107956.1-201ENST00000494359 873 ntBASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC00588Q9Y4M8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 AL135905.2-201ENST00000584934 1404 ntBASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 AC012618.2-201ENST00000428058 849 ntBASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 SNORA78-201ENST00000459373 127 ntBASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 MIR4497-201ENST00000583208 89 ntBASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 AC233702.5-201ENST00000584107 538 ntBASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00588Q9Y4M8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00588Q9Y4M8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms