Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 AC136469.2-201ENST00000623944 1028 ntBASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 AL138781.2-201ENST00000617896 1843 ntBASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COMMD3Q9UBI1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 LINC01465-201ENST00000408887 1940 ntBASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COMMD3Q9UBI1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 AL032819.2-201ENST00000624543 2162 ntBASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 AC005224.4-201ENST00000583262 1652 ntBASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
COMMD3Q9UBI1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
COMMD3Q9UBI1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 KRT16P3-201ENST00000439127 1283 ntBASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms