Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.28■■□□□ 1
CHD7Q9P2D1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHD7Q9P2D1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.28■■□□□ 1
CHD7Q9P2D1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.28■■□□□ 1
CHD7Q9P2D1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
CHD7Q9P2D1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 CLEC4GP1-201ENST00000596555 870 ntBASIC21.28■■□□□ 1
CHD7Q9P2D1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CHD7Q9P2D1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD7Q9P2D1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 TSPY5P-201ENST00000426936 936 ntBASIC21.27■■□□□ 1
CHD7Q9P2D1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.27■■□□□ 1
CHD7Q9P2D1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.27■■□□□ 1
CHD7Q9P2D1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CHD7Q9P2D1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.27■■□□□ 1
CHD7Q9P2D1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CHD7Q9P2D1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CHD7Q9P2D1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CHD7Q9P2D1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD7Q9P2D1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.27■■□□□ 1
CHD7Q9P2D1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.27■■□□□ 1
CHD7Q9P2D1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD7Q9P2D1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD7Q9P2D1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CHD7Q9P2D1 AC011506.1-201ENST00000474329 610 ntBASIC21.27■□□□□ 0.99
CHD7Q9P2D1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.27■□□□□ 0.99
CHD7Q9P2D1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.27■□□□□ 0.99
CHD7Q9P2D1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 AC097488.1-201ENST00000507834 756 ntBASIC21.26■□□□□ 0.99
CHD7Q9P2D1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD7Q9P2D1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 AC011558.1-201ENST00000623459 338 ntBASIC21.25■□□□□ 0.99
CHD7Q9P2D1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD7Q9P2D1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 AL121956.5-201ENST00000625261 221 ntBASIC21.24■□□□□ 0.99
CHD7Q9P2D1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD7Q9P2D1 AC130371.2-201ENST00000619443 611 ntBASIC21.24■□□□□ 0.99
CHD7Q9P2D1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 C1QL1P1-201ENST00000568105 661 ntBASIC21.23■□□□□ 0.99
CHD7Q9P2D1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 AC093458.2-201ENST00000623150 629 ntBASIC21.23■□□□□ 0.99
CHD7Q9P2D1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD7Q9P2D1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms