Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 MCRIP2P1-201ENST00000394346 511 ntBASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KCNIP1Q9NZI2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 KRT18P5-201ENST00000436075 1291 ntBASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 BX119927.1-201ENST00000636596 1552 ntBASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KCNIP1Q9NZI2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 AC016405.3-201ENST00000607710 860 ntBASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 AC100791.3-201ENST00000617619 330 ntBASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 AC008694.1-202ENST00000636953 945 ntBASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
KCNIP1Q9NZI2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 RARRES2P4-201ENST00000514074 484 ntBASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 AC069236.1-201ENST00000604339 616 ntBASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 TMEM179-206ENST00000616017 1645 ntBASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNIP1Q9NZI2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms