Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.5■□□□□ 0.23
CALYQ9NYX4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 MIPEPP3-201ENST00000412105 444 ntBASIC16.5■□□□□ 0.23
CALYQ9NYX4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.5■□□□□ 0.23
CALYQ9NYX4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CALYQ9NYX4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.5■□□□□ 0.23
CALYQ9NYX4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CALYQ9NYX4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 GPX1P1-201ENST00000388829 606 ntBASIC16.49■□□□□ 0.23
CALYQ9NYX4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 NCF1B-203ENST00000435988 1254 ntBASIC16.49■□□□□ 0.23
CALYQ9NYX4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 AC023632.3-201ENST00000521633 145 ntBASIC16.49■□□□□ 0.23
CALYQ9NYX4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CALYQ9NYX4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CALYQ9NYX4 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.49■□□□□ 0.23
CALYQ9NYX4 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.48■□□□□ 0.23
CALYQ9NYX4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.48■□□□□ 0.23
CALYQ9NYX4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CALYQ9NYX4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 GUSBP6-202ENST00000438529 1198 ntBASIC16.47■□□□□ 0.23
CALYQ9NYX4 TSPY6P-201ENST00000448518 926 ntBASIC16.47■□□□□ 0.23
CALYQ9NYX4 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.47■□□□□ 0.23
CALYQ9NYX4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 AC092118.2-201ENST00000613495 667 ntBASIC16.47■□□□□ 0.23
CALYQ9NYX4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 TMEM179-206ENST00000616017 1645 ntBASIC16.47■□□□□ 0.23
CALYQ9NYX4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.47■□□□□ 0.23
CALYQ9NYX4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CALYQ9NYX4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CALYQ9NYX4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CALYQ9NYX4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CALYQ9NYX4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CALYQ9NYX4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms