Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 RARRES2P4-201ENST00000514074 484 ntBASIC18.73■□□□□ 0.59
THUMPD1Q9NXG2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.73■□□□□ 0.59
THUMPD1Q9NXG2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD1Q9NXG2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD1Q9NXG2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
THUMPD1Q9NXG2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 AC016405.3-201ENST00000607710 860 ntBASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
THUMPD1Q9NXG2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 AL691432.2-201ENST00000607222 2038 ntBASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 AC016769.1-201ENST00000409132 1010 ntBASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THUMPD1Q9NXG2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
THUMPD1Q9NXG2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
THUMPD1Q9NXG2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 MFSD11-216ENST00000590393 1141 ntBASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 AC087623.3-201ENST00000607047 1098 ntBASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
THUMPD1Q9NXG2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms