Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2LQ9NUG4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 CD99P1-205ENST00000527459 561 ntBASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCM2LQ9NUG4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CCM2LQ9NUG4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 DPP3P2-201ENST00000416030 1696 ntBASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 NCF1B-203ENST00000435988 1254 ntBASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2LQ9NUG4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCM2LQ9NUG4 NEFHP1-201ENST00000412845 2629 ntBASIC18.89■□□□□ 0.62
CCM2LQ9NUG4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.89■□□□□ 0.62
CCM2LQ9NUG4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCM2LQ9NUG4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 POU5F1P4-201ENST00000413175 1085 ntBASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms