Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SP110Q9HB58 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SP110Q9HB58 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SP110Q9HB58 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SP110Q9HB58 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SP110Q9HB58 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SP110Q9HB58 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.42■□□□□ 0.86
SP110Q9HB58 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SP110Q9HB58 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SP110Q9HB58 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.41■□□□□ 0.86
SP110Q9HB58 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.41■□□□□ 0.86
SP110Q9HB58 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.41■□□□□ 0.86
SP110Q9HB58 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.41■□□□□ 0.86
SP110Q9HB58 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SP110Q9HB58 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.41■□□□□ 0.86
SP110Q9HB58 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.41■□□□□ 0.86
SP110Q9HB58 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SP110Q9HB58 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SP110Q9HB58 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.4■□□□□ 0.86
SP110Q9HB58 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SP110Q9HB58 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.4■□□□□ 0.86
SP110Q9HB58 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.4■□□□□ 0.86
SP110Q9HB58 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.4■□□□□ 0.86
SP110Q9HB58 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.4■□□□□ 0.86
SP110Q9HB58 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SP110Q9HB58 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.4■□□□□ 0.86
SP110Q9HB58 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SP110Q9HB58 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SP110Q9HB58 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.39■□□□□ 0.86
SP110Q9HB58 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SP110Q9HB58 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.39■□□□□ 0.86
SP110Q9HB58 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SP110Q9HB58 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SP110Q9HB58 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SP110Q9HB58 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.39■□□□□ 0.85
SP110Q9HB58 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.39■□□□□ 0.85
SP110Q9HB58 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 SOX15-203ENST00000570788 1093 ntBASIC20.39■□□□□ 0.85
SP110Q9HB58 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SP110Q9HB58 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.39■□□□□ 0.85
SP110Q9HB58 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SP110Q9HB58 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.38■□□□□ 0.85
SP110Q9HB58 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.38■□□□□ 0.85
SP110Q9HB58 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SP110Q9HB58 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SP110Q9HB58 CD99P1-205ENST00000527459 561 ntBASIC20.38■□□□□ 0.85
SP110Q9HB58 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SP110Q9HB58 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.38■□□□□ 0.85
SP110Q9HB58 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.38■□□□□ 0.85
SP110Q9HB58 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.38■□□□□ 0.85
SP110Q9HB58 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
SP110Q9HB58 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.38■□□□□ 0.85
SP110Q9HB58 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SP110Q9HB58 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.38■□□□□ 0.85
SP110Q9HB58 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms