Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AL589743.5-201ENST00000616611 1050 ntBASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK4Q9HAZ1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 AC142086.2-201ENST00000569753 217 ntBASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 AC092118.2-201ENST00000613495 667 ntBASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK4Q9HAZ1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLK4Q9HAZ1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLK4Q9HAZ1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.33■□□□□ 0.69
CLK4Q9HAZ1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLK4Q9HAZ1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLK4Q9HAZ1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLK4Q9HAZ1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 MIPEPP3-201ENST00000412105 444 ntBASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 MIR2861-201ENST00000636310 90 ntBASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK4Q9HAZ1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 HLA-L-209ENST00000420110 1011 ntBASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CLK4Q9HAZ1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 LSM12P1-201ENST00000411836 588 ntBASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK4Q9HAZ1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms