Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 AF186192.3-201ENST00000583427 947 ntBASIC23.29■■□□□ 1.32
SH2D4AQ9H788 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.29■■□□□ 1.32
SH2D4AQ9H788 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 BX088651.1-201ENST00000540551 451 ntBASIC23.28■■□□□ 1.32
SH2D4AQ9H788 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 AC007225.1-201ENST00000566331 1836 ntBASIC23.28■■□□□ 1.32
SH2D4AQ9H788 AC005229.4-201ENST00000610085 2198 ntBASIC23.28■■□□□ 1.32
SH2D4AQ9H788 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SH2D4AQ9H788 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SH2D4AQ9H788 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SH2D4AQ9H788 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH2D4AQ9H788 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.27■■□□□ 1.32
SH2D4AQ9H788 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.27■■□□□ 1.32
SH2D4AQ9H788 REXO1L12P-201ENST00000622156 912 ntBASIC23.27■■□□□ 1.32
SH2D4AQ9H788 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SH2D4AQ9H788 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 DPP3P2-201ENST00000416030 1696 ntBASIC23.26■■□□□ 1.31
SH2D4AQ9H788 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.26■■□□□ 1.31
SH2D4AQ9H788 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SH2D4AQ9H788 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SH2D4AQ9H788 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 AC073195.1-201ENST00000607241 877 ntBASIC23.24■■□□□ 1.31
SH2D4AQ9H788 AC026471.5-201ENST00000615068 467 ntBASIC23.24■■□□□ 1.31
SH2D4AQ9H788 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 KRT16P6-202ENST00000425692 1426 ntBASIC23.24■■□□□ 1.31
SH2D4AQ9H788 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SH2D4AQ9H788 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms