Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 UPK3BP1-201ENST00000428678 509 ntBASIC20.07■□□□□ 0.8
CHRDQ9H2X0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 AC063952.2-201ENST00000498792 1227 ntBASIC20.07■□□□□ 0.8
CHRDQ9H2X0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CHRDQ9H2X0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 AC011506.1-201ENST00000474329 610 ntBASIC20.06■□□□□ 0.8
CHRDQ9H2X0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 FAM87A-204ENST00000613235 858 ntBASIC20.06■□□□□ 0.8
CHRDQ9H2X0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRDQ9H2X0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 CRYGFP-201ENST00000418459 633 ntBASIC20.05■□□□□ 0.8
CHRDQ9H2X0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 AC097488.1-201ENST00000507834 756 ntBASIC20.05■□□□□ 0.8
CHRDQ9H2X0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 AL358472.4-201ENST00000633140 710 ntBASIC20.05■□□□□ 0.8
CHRDQ9H2X0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 AP006587.1-201ENST00000534129 1502 ntBASIC20.05■□□□□ 0.8
CHRDQ9H2X0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHRDQ9H2X0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHRDQ9H2X0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 AC004980.1-204ENST00000429707 299 ntBASIC20.03■□□□□ 0.8
CHRDQ9H2X0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHRDQ9H2X0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHRDQ9H2X0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms