Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.01■□□□□ 0.79
VPS11Q9H270 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS11Q9H270 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VPS11Q9H270 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.01■□□□□ 0.79
VPS11Q9H270 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.01■□□□□ 0.79
VPS11Q9H270 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
VPS11Q9H270 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS11Q9H270 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS11Q9H270 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VPS11Q9H270 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VPS11Q9H270 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20■□□□□ 0.79
VPS11Q9H270 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20■□□□□ 0.79
VPS11Q9H270 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VPS11Q9H270 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20■□□□□ 0.79
VPS11Q9H270 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS11Q9H270 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VPS11Q9H270 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS11Q9H270 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VPS11Q9H270 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VPS11Q9H270 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VPS11Q9H270 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
VPS11Q9H270 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
VPS11Q9H270 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 KRT18P61-201ENST00000585825 1298 ntBASIC19.99■□□□□ 0.79
VPS11Q9H270 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS11Q9H270 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS11Q9H270 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS11Q9H270 Z82202.1-201ENST00000623446 1880 ntBASIC19.99■□□□□ 0.79
VPS11Q9H270 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
VPS11Q9H270 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS11Q9H270 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 AC097381.1-201ENST00000429019 1296 ntBASIC19.98■□□□□ 0.79
VPS11Q9H270 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS11Q9H270 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS11Q9H270 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VPS11Q9H270 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
VPS11Q9H270 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS11Q9H270 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.98■□□□□ 0.79
VPS11Q9H270 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS11Q9H270 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
VPS11Q9H270 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.97■□□□□ 0.79
VPS11Q9H270 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.97■□□□□ 0.79
VPS11Q9H270 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VPS11Q9H270 ZNRF2P3-201ENST00000424200 374 ntBASIC19.97■□□□□ 0.79
VPS11Q9H270 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.97■□□□□ 0.79
VPS11Q9H270 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VPS11Q9H270 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms