Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3Q9BZ76 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP3Q9BZ76 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 MESTP1-201ENST00000404287 994 ntBASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP3Q9BZ76 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3Q9BZ76 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3Q9BZ76 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CNTNAP3Q9BZ76 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.02■□□□□ 0.63
CNTNAP3Q9BZ76 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP3Q9BZ76 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 AL671883.3-201ENST00000603274 991 ntBASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP3Q9BZ76 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 ANKRD20A18P-201ENST00000359341 492 ntBASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP3Q9BZ76 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 FSCN1P1-201ENST00000568912 1481 ntBASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 AC092119.3-201ENST00000612618 583 ntBASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNTNAP3Q9BZ76 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms