Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 AC128676.1-201ENST00000454392 318 ntBASIC13.84□□□□□ -0.19
UPK3BQ9BT76 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.84□□□□□ -0.19
UPK3BQ9BT76 AC023632.3-201ENST00000521633 145 ntBASIC13.84□□□□□ -0.19
UPK3BQ9BT76 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 SOX15-203ENST00000570788 1093 ntBASIC13.84□□□□□ -0.19
UPK3BQ9BT76 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UPK3BQ9BT76 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UPK3BQ9BT76 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 PRORSD1P-201ENST00000295112 541 ntBASIC13.83□□□□□ -0.2
UPK3BQ9BT76 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK3BQ9BT76 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 POM121L13P-201ENST00000422362 380 ntBASIC13.82□□□□□ -0.2
UPK3BQ9BT76 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 AC008687.6-201ENST00000596318 630 ntBASIC13.82□□□□□ -0.2
UPK3BQ9BT76 AC073648.6-201ENST00000641589 218 ntBASIC13.82□□□□□ -0.2
UPK3BQ9BT76 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UPK3BQ9BT76 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms