Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 AC099778.1-201ENST00000568593 1911 ntBASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 FAM201B-201ENST00000458407 597 ntBASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.62■□□□□ 0.73
CCM2Q9BSQ5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 AL391422.3-201ENST00000603791 2761 ntBASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCM2Q9BSQ5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 ESRRAP1-201ENST00000400596 1257 ntBASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 POU5F1P3-201ENST00000428824 1078 ntBASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 MIR4651-201ENST00000582622 73 ntBASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 AC008687.6-201ENST00000596318 630 ntBASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 AC120498.8-201ENST00000614275 531 ntBASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2Q9BSQ5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 TSPY20P-201ENST00000450910 630 ntBASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 AC008403.3-201ENST00000598924 454 ntBASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2Q9BSQ5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms