Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 AC120498.9-201ENST00000339021 3867 ntBASIC19.41■□□□□ 0.7
EBF4Q9BQW3 AC009237.14-201ENST00000609975 1594 ntBASIC19.41■□□□□ 0.7
EBF4Q9BQW3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 AP001160.3-201ENST00000601484 763 ntBASIC19.41■□□□□ 0.7
EBF4Q9BQW3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.41■□□□□ 0.7
EBF4Q9BQW3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 AC243732.1-201ENST00000612648 864 ntBASIC19.4■□□□□ 0.7
EBF4Q9BQW3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.4■□□□□ 0.7
EBF4Q9BQW3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EBF4Q9BQW3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
EBF4Q9BQW3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EBF4Q9BQW3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EBF4Q9BQW3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EBF4Q9BQW3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EBF4Q9BQW3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EBF4Q9BQW3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EBF4Q9BQW3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 AC105265.2-201ENST00000467189 838 ntBASIC19.38■□□□□ 0.69
EBF4Q9BQW3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 CCDC92B-201ENST00000575506 885 ntBASIC19.38■□□□□ 0.69
EBF4Q9BQW3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 AC110285.6-201ENST00000617652 491 ntBASIC19.38■□□□□ 0.69
EBF4Q9BQW3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EBF4Q9BQW3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms