Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP4Q99569 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 KRT16P6-202ENST00000425692 1426 ntBASIC19.42■□□□□ 0.7
PKP4Q99569 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PKP4Q99569 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.41■□□□□ 0.7
PKP4Q99569 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 AC060766.5-201ENST00000590539 871 ntBASIC19.41■□□□□ 0.7
PKP4Q99569 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.41■□□□□ 0.7
PKP4Q99569 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PKP4Q99569 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKP4Q99569 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PKP4Q99569 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PKP4Q99569 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP4Q99569 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PKP4Q99569 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.4■□□□□ 0.7
PKP4Q99569 AL390719.1-204ENST00000412397 1219 ntBASIC19.4■□□□□ 0.7
PKP4Q99569 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP4Q99569 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.4■□□□□ 0.7
PKP4Q99569 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.4■□□□□ 0.7
PKP4Q99569 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 PNMA6B-201ENST00000538162 1200 ntBASIC19.4■□□□□ 0.7
PKP4Q99569 AC006557.6-201ENST00000623071 864 ntBASIC19.4■□□□□ 0.7
PKP4Q99569 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PKP4Q99569 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.4■□□□□ 0.7
PKP4Q99569 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.4■□□□□ 0.7
PKP4Q99569 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP4Q99569 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP4Q99569 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.4■□□□□ 0.7
PKP4Q99569 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
PKP4Q99569 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PKP4Q99569 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PKP4Q99569 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.39■□□□□ 0.69
PKP4Q99569 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.39■□□□□ 0.69
PKP4Q99569 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.39■□□□□ 0.69
PKP4Q99569 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.39■□□□□ 0.69
PKP4Q99569 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.39■□□□□ 0.69
PKP4Q99569 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PKP4Q99569 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKP4Q99569 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PKP4Q99569 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.38■□□□□ 0.69
PKP4Q99569 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.38■□□□□ 0.69
PKP4Q99569 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.38■□□□□ 0.69
PKP4Q99569 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.38■□□□□ 0.69
PKP4Q99569 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.38■□□□□ 0.69
PKP4Q99569 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PKP4Q99569 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKP4Q99569 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms