Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.58■□□□□ 0.88
CSPG4P5Q96PW8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 AC069152.1-201ENST00000438030 544 ntBASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 AC083880.1-201ENST00000608266 535 ntBASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 AC125437.2-201ENST00000625180 2167 ntBASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSPG4P5Q96PW8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 AC005829.2-201ENST00000571422 1056 ntBASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSPG4P5Q96PW8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 AC133041.1-202ENST00000642053 222 ntBASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.55■□□□□ 0.88
CSPG4P5Q96PW8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG4P5Q96PW8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 AL355802.2-201ENST00000402069 882 ntBASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 HLA-B-256ENST00000639848 1089 ntBASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 AC009237.14-201ENST00000609975 1594 ntBASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG4P5Q96PW8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms