Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL21A1Q96P44 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.81■□□□□ 0.6
COL21A1Q96P44 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.81■□□□□ 0.6
COL21A1Q96P44 CYP2T3P-201ENST00000601990 817 ntBASIC18.81■□□□□ 0.6
COL21A1Q96P44 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.81■□□□□ 0.6
COL21A1Q96P44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL21A1Q96P44 DPP3P2-201ENST00000416030 1696 ntBASIC18.81■□□□□ 0.6
COL21A1Q96P44 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL21A1Q96P44 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL21A1Q96P44 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL21A1Q96P44 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL21A1Q96P44 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL21A1Q96P44 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
COL21A1Q96P44 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 KRT18P68-201ENST00000392293 1000 ntBASIC18.8■□□□□ 0.6
COL21A1Q96P44 AL355472.2-201ENST00000422958 438 ntBASIC18.8■□□□□ 0.6
COL21A1Q96P44 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 AL109923.1-201ENST00000618799 583 ntBASIC18.8■□□□□ 0.6
COL21A1Q96P44 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL21A1Q96P44 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL21A1Q96P44 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 AL020996.1-203ENST00000536896 2307 ntBASIC18.79■□□□□ 0.6
COL21A1Q96P44 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
COL21A1Q96P44 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL21A1Q96P44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 ID1-201ENST00000376105 1233 ntBASIC18.78■□□□□ 0.6
COL21A1Q96P44 BX276092.2-201ENST00000417668 665 ntBASIC18.78■□□□□ 0.6
COL21A1Q96P44 GUSBP6-202ENST00000438529 1198 ntBASIC18.78■□□□□ 0.6
COL21A1Q96P44 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 AC104771.1-201ENST00000603335 964 ntBASIC18.78■□□□□ 0.6
COL21A1Q96P44 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 AL356652.1-201ENST00000615962 565 ntBASIC18.78■□□□□ 0.6
COL21A1Q96P44 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL21A1Q96P44 AIRN-201ENST00000601203 4374 ntBASIC18.78■□□□□ 0.6
COL21A1Q96P44 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL21A1Q96P44 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.77■□□□□ 0.6
COL21A1Q96P44 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
COL21A1Q96P44 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 HLA-L-209ENST00000420110 1011 ntBASIC18.77■□□□□ 0.6
COL21A1Q96P44 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.77■□□□□ 0.6
COL21A1Q96P44 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 AL589743.5-201ENST00000616611 1050 ntBASIC18.77■□□□□ 0.6
COL21A1Q96P44 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.77■□□□□ 0.6
COL21A1Q96P44 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.77■□□□□ 0.6
COL21A1Q96P44 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms