Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.4■■□□□ 1.82
NBPF4Q96M43 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.39■■□□□ 1.82
NBPF4Q96M43 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.39■■□□□ 1.82
NBPF4Q96M43 DPP3P2-201ENST00000416030 1696 ntBASIC26.39■■□□□ 1.82
NBPF4Q96M43 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NBPF4Q96M43 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC26.39■■□□□ 1.82
NBPF4Q96M43 KRT18P35-201ENST00000510488 1269 ntBASIC26.39■■□□□ 1.82
NBPF4Q96M43 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.39■■□□□ 1.82
NBPF4Q96M43 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC26.39■■□□□ 1.82
NBPF4Q96M43 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.39■■□□□ 1.82
NBPF4Q96M43 AC005363.2-201ENST00000618631 242 ntBASIC26.39■■□□□ 1.82
NBPF4Q96M43 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NBPF4Q96M43 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NBPF4Q96M43 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NBPF4Q96M43 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NBPF4Q96M43 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NBPF4Q96M43 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 LINC01568-207ENST00000641790 1380 ntBASIC26.38■■□□□ 1.81
NBPF4Q96M43 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.38■■□□□ 1.81
NBPF4Q96M43 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NBPF4Q96M43 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
NBPF4Q96M43 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NBPF4Q96M43 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.37■■□□□ 1.81
NBPF4Q96M43 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
NBPF4Q96M43 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NBPF4Q96M43 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NBPF4Q96M43 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26.36■■□□□ 1.81
NBPF4Q96M43 C1QL1P1-201ENST00000568105 661 ntBASIC26.36■■□□□ 1.81
NBPF4Q96M43 ABBA01031674.1-201ENST00000635145 728 ntBASIC26.36■■□□□ 1.81
NBPF4Q96M43 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
NBPF4Q96M43 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
NBPF4Q96M43 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NBPF4Q96M43 AC006128.1-201ENST00000624704 1661 ntBASIC26.35■■□□□ 1.81
NBPF4Q96M43 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NBPF4Q96M43 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NBPF4Q96M43 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
NBPF4Q96M43 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
NBPF4Q96M43 TFP1-202ENST00000475455 1573 ntBASIC26.35■■□□□ 1.81
NBPF4Q96M43 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
NBPF4Q96M43 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
NBPF4Q96M43 AC116351.2-201ENST00000606540 1585 ntBASIC26.35■■□□□ 1.81
NBPF4Q96M43 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.35■■□□□ 1.81
NBPF4Q96M43 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
NBPF4Q96M43 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NBPF4Q96M43 AP006587.1-201ENST00000534129 1502 ntBASIC26.34■■□□□ 1.81
NBPF4Q96M43 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 AC073508.3-201ENST00000619697 1419 ntBASIC26.34■■□□□ 1.81
NBPF4Q96M43 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.34■■□□□ 1.81
NBPF4Q96M43 AC026310.3-201ENST00000625186 2373 ntBASIC26.34■■□□□ 1.81
NBPF4Q96M43 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
NBPF4Q96M43 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
NBPF4Q96M43 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
NBPF4Q96M43 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
NBPF4Q96M43 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NBPF4Q96M43 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.33■■□□□ 1.81
NBPF4Q96M43 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms